| Affymetrix CEL |
Affymetrix CEL file. |
http://media.affymetrix.com/support/developer/powertools/changelog/gcos-agcc/cel.html |
| Affymetrix format |
Affymetrix genotyping format. |
http://www.affymetrix.com/support/technical/whitepapers.affx |
| Affymetrix other |
Other Affymetrix file formats (DAT, RPT, and TXT formats). |
http://www.affymetrix.com/support/technical/whitepapers.affx |
| Archived |
Files stored and not linked to result data. |
http://immport.org/immport-open/public/home/documentation |
| Assessment |
Assessment result |
|
| BAM |
Binary representation of SAM (Sequence Alignment/Map). |
https://en.wikipedia.org/wiki/Binary_Alignment_Map |
| Converted FCS file |
FCS file converted for FLOW analysis. |
https://en.wikipedia.org/wiki/Flow_Cytometry_Standard
http://bioconductor.org/packages/release/bioc/html/flowCore.html
|
| CRF Description |
Assessment CRF document. |
http://purl.obolibrary.org/obo/NCIT_C40988 |
| Custom |
A user defined custom format. |
http://immport.org/immport-open/public/home/documentation |
| Custom assay result |
Custom assay result. |
http://immport.org/immport-open/public/home/documentation |
| CyTOF result |
CyTOF result. |
http://immport.org/immport-open/public/home/documentation
https://en.wikipedia.org/wiki/Mass_cytometry
|
| CyTOF workspace |
CyTOF analysis software workspace. |
http://immport.org/immport-open/public/home/documentation |
| ELISA result |
Measurement values from ELISA assays. |
http://purl.obolibrary.org/obo/NCIT_C16553 |
| ELISPOT result |
Measurement values from ELISpot assays. |
http://immport.org/immport-open/public/home/documentation
http://purl.obolibrary.org/obo/NCIT_C102632
|
| FASTQ |
FASTQ- sequencing read data file format for combining the sequence and per base quality score. |
https://en.wikipedia.org/wiki/FASTQ_format |
| Flow cytometry compensation or control |
Flow cytometry compensation or control files. |
http://flowbook.denovosoftware.com/chapter-5-immunofluorescence-and-colour-compensation |
| Flow cytometry result |
Flow cytometry result. |
http://flowbook.denovosoftware.com/chapter-5-immunofluorescence-and-colour-compensation |
| Flow cytometry result in text format |
Flow cytometer or analysis software output in text format. |
https://en.wikipedia.org/wiki/Flow_Cytometry_Standard
http://bioconductor.org/packages/release/bioc/html/flowCore.html
|
| Flow cytometry workspace |
Flow cytometry analysis software workspace. |
http://docs.flowjo.com/vx/workspaces-and-samples/ws-savinganalysis/ |
| FPKM |
Fragments Per Kilobase Of Exon Per Million Fragments- Measurement of mRNA abundance using RNA-seq data. |
http://www.ncbi.nlm.nih.gov/pubmed/20436464 |
| Gene expression result |
Measurement values from Gene expression assays. |
http://immport.org/immport-open/public/home/documentation
http://purl.obolibrary.org/obo/NCIT_C16608
|
| GenePattern data set |
GenePattern GCT file format. |
http://www.broadinstitute.org/cancer/software/genepattern/file-formats-guide |
| Genotyping result |
Measurement Genotyping result. |
http://immport.org/immport-open/public/home/documentation
http://purl.obolibrary.org/obo/NCIT_C45447
|
| HAI description |
Metadata for HAI results. |
http://immport.org/immport-open/public/home/documentation |
| HAI result |
HAI result. |
http://immport.org/immport-open/public/home/documentation
http://purl.obolibrary.org/obo/NCIT_C120688
|
| Hemagglutination inhibition result |
HIA result in custom format. |
http://immport.org/immport-open/public/home/documentation |
| HLA result |
HLA result in ImmPort format. |
http://immport.org/immport-open/public/home/documentation |
| Illumina BeadArray |
Illumina BeadArray format. |
http://www.illumina.com/content/illumina-marketing/amr/en_US/technology/beadarray-technology.html |
| Illumina GA |
Illumina Genome Analyzer sequencer non-normalized result. |
http://purl.obolibrary.org/obo/NCIT_C146817 |
| Image Histology result |
Image Histology result |
http://immport.org/immport-open/public/home/documentation |
| ImmPort BDC file |
ImmPort defined file format for database updates. |
http://immport.org/immport-open/public/home/documentation |
| ImmPort template |
ImmPort defined file format. |
http://immport.org/immport-open/public/home/documentation |
| KIR result |
KIR result. |
http://immport.org/immport-open/public/home/documentation |
| Markers or channels description |
Description of marker or channels in a FCS file. |
http://immport.org/immport-open/public/home/documentation |
| Mass spectrometry result |
Mass result in custom format. |
http://immport.org/immport-open/public/home/documentation |
| MBAA |
Multiplex Bead Array Assay. |
http://immport.org/immport-open/public/home/documentation |
| MBAA result |
Multiplex Bead Array Assay. bead level result are the primary output of MBBA instruments. |
http://immport.org/immport-open/public/home/documentation |
| Neutralizing antibody titer result |
Neutralizing antibody titer result |
http://immport.org/immport-open/public/home/documentation
http://purl.obolibrary.org/obo/NCIT_C94196
|
| Q-PCR result |
Q-PCR result file. |
http://immport.org/immport-open/public/home/documentation |
| RNA sequencing result |
Measurement RNA sequencing result. |
http://purl.obolibrary.org/obo/NCIT_C124261 |
| RPKM |
Reads Per Kilobase per Million reads- Measurement of mRNA abundance using RNA-seq data. |
http://www.ncbi.nlm.nih.gov/pubmed/18516045 |
| TPM |
Transcripts per million reads- Measurement of mRNA abundance using RNA-seq data. |
http://www.ncbi.nlm.nih.gov/pubmed/22872506 |
| Virus neutralization result |
Virus neutralization results. |
http://immport.org/immport-open/public/home/documentation
http://purl.obolibrary.org/obo/NCIT_C94196
|
| Virus titer result |
Measurement of virus titer. |
http://immport.org/immport-open/public/home/documentation
http://purl.obolibrary.org/obo/NCIT_C67454
|