hla_typing
| Name | HLA_Typing.txt |
| JSON File Name | HLA_Typing.json |
| Type | multiple |
| Schema Version | 3.37 |
| Description | The HLA experiment sample template defines and annotates the assay results for a sample by linking sample, experiment, and results together. |
| Download | ⬇️ HLA_Typing.xlsx ⬇️ HLA_Typing.txt ⬇️ HLA_Typing.json This top-level schema references companion files (e.g. HLA_Typing.Datum.json) in the same json-templates folder — download the all_templates.zip to get them all together. |
Reading this table: see How to read the template documentation for what Required / Conditionally required / Optional mean and how to read the Type & Constraints column.
At least one of HLA-A Allele 1, HLA-A Allele 2, HLA-B Allele 1, HLA-B Allele 2, HLA-C Allele 1, HLA-C Allele 2, HLA-DPA1 Allele 1, HLA-DPA1 Allele 2, HLA-DPB1 Allele 1, HLA-DPB1 Allele 2, HLA-DQA1 Allele 1, HLA-DQA1 Allele 2, HLA-DQB1 Allele 1, HLA-DQB1 Allele 2, HLA-DRB1 Allele 1, HLA-DRB1 Allele 2, HLA-DRB3 Allele 1, HLA-DRB3 Allele 2, HLA-DRB4 Allele 1, HLA-DRB4 Allele 2, HLA-DRB5 Allele 1, HLA-DRB5 Allele 2 is required when Expsample ID is provided.
| Template Column | Requirement | Type & Constraints | Description |
|---|---|---|---|
| Expsample ID | Required | Text, max 15 characters Reference — must already exist (in this package or the workspace) as a expsampleJSON: expsampleId (string) | The experiment sample identifier must be stored in ImmPort or in the experimentsamples.txt template. Please enter either an experiment sample user defined ID or ImmPort accession. |
| Ancestral Population | Required | Text, max 250 characters Controlled vocabulary — value must be one of lk_ancestral_population JSON: ancestralPopulation (array) | ImmPort recommends using population names as defined by the http://www.allelefrequencies.net site. |
| HLA-A Allele 1 | Optional | Text, max 250 characters JSON: hlaAAllele1 (string) | |
| HLA-A Allele 2 | Optional | Text, max 250 characters JSON: hlaAAllele2 (string) | |
| HLA-B Allele 1 | Optional | Text, max 250 characters JSON: hlaBAllele1 (string) | |
| HLA-B Allele 2 | Optional | Text, max 250 characters JSON: hlaBAllele2 (string) | |
| HLA-C Allele 1 | Optional | Text, max 250 characters JSON: hlaCAllele1 (string) | |
| HLA-C Allele 2 | Optional | Text, max 250 characters JSON: hlaCAllele2 (string) | |
| HLA-DPA1 Allele 1 | Optional | Text, max 250 characters JSON: hlaDpa1Allele1 (string) | |
| HLA-DPA1 Allele 2 | Optional | Text, max 250 characters JSON: hlaDpa1Allele2 (string) | |
| HLA-DPB1 Allele 1 | Optional | Text, max 250 characters JSON: hlaDpb1Allele1 (string) | |
| HLA-DPB1 Allele 2 | Optional | Text, max 250 characters JSON: hlaDpb1Allele2 (string) | |
| HLA-DQA1 Allele 1 | Optional | Text, max 250 characters JSON: hlaDqa1Allele1 (string) | |
| HLA-DQA1 Allele 2 | Optional | Text, max 250 characters JSON: hlaDqa1Allele2 (string) | |
| HLA-DQB1 Allele 1 | Optional | Text, max 250 characters JSON: hlaDqb1Allele1 (string) | |
| HLA-DQB1 Allele 2 | Optional | Text, max 250 characters JSON: hlaDqb1Allele2 (string) | |
| HLA-DRB1 Allele 1 | Optional | Text, max 250 characters JSON: hlaDrb1Allele1 (string) | |
| HLA-DRB1 Allele 2 | Optional | Text, max 250 characters JSON: hlaDrb1Allele2 (string) | |
| HLA-DRB3 Allele 1 | Optional | Text, max 250 characters JSON: hlaDrb3Allele1 (string) | |
| HLA-DRB3 Allele 2 | Optional | Text, max 250 characters JSON: hlaDrb3Allele2 (string) | |
| HLA-DRB4 Allele 1 | Optional | Text, max 250 characters JSON: hlaDrb4Allele1 (string) | |
| HLA-DRB4 Allele 2 | Optional | Text, max 250 characters JSON: hlaDrb4Allele2 (string) | |
| HLA-DRB5 Allele 1 | Optional | Text, max 250 characters JSON: hlaDrb5Allele1 (string) | |
| HLA-DRB5 Allele 2 | Optional | Text, max 250 characters JSON: hlaDrb5Allele2 (string) | |
| Comments | Optional | Text, max 500 characters JSON: comments (string) | Comments captures additional descriptive information. |